Developing clinically relevant biomarkers in inflammatory arthritis: A multiplatform approach for serum candidate protein discovery
Identifieur interne : 000E20 ( Main/Exploration ); précédent : 000E19; suivant : 000E21Developing clinically relevant biomarkers in inflammatory arthritis: A multiplatform approach for serum candidate protein discovery
Auteurs : Angela Mcardle [Irlande (pays)] ; Aisha Qasim Butt [Irlande (pays)] ; Agnes Szentpetery [Irlande (pays)] ; Wilco De Jager [Pays-Bas] ; Sytze De Roock [Pays-Bas] ; Oliver Fitzgerald [Irlande (pays)] ; Stephen R. Pennington [Irlande (pays)]Source :
- PROTEOMICS – Clinical Applications [ 1862-8346 ] ; 2016-06.
Abstract
Purpose: To identify candidate biomarkers that have the potential to distinguish between patients with psoriatic arthritis (PsA) or rheumatoid arthritis (RA) and explore the value of combining different protein discovery platforms for the development of a multiplexed protein biomarker panel. Experimental design: Serum samples from 32 patients (PsA; n = 16 and RA; n = 16) defined as active, early onset, and treatment naïve were analyzed using unbiased label‐free LC‐MS/MS, a microsphere bead‐based immunoassay (Luminex xMAP) and an aptamer‐based assay (SOMAscan). Results: LC‐MS/MS was used to quantify 324 proteins, while the Luminex xMAP targeted 48 proteins and SOMAscan supported the measurement of 1129 proteins. The combined data from these techniques gave reproducible quantification of 1501 proteins in total. Of these, 42 (LC‐MS/MS), 3 (Luminex xMAP), and 127 (SOMAscan) proteins were found to be differentially expressed between PsA and RA (p < 0.05). Conclusion and clinical relevance: Using three different and potentially complementary proteomic platforms we identified a total of 172 proteins that are differentially expressed in patients with PsA compared to RA. These proteins collectively represent candidates for inclusion in a protein signature that could be developed as a diagnostic test to discriminate patients with PsA from RA and therefore be of clinical utility.
Url:
DOI: 10.1002/prca.201500046
Affiliations:
Links toward previous steps (curation, corpus...)
- to stream Istex, to step Corpus: 001D06
- to stream Istex, to step Curation: 001D06
- to stream Istex, to step Checkpoint: 000039
- to stream Main, to step Merge: 000E21
- to stream Main, to step Curation: 000E20
Le document en format XML
<record><TEI wicri:istexFullTextTei="biblStruct"><teiHeader><fileDesc><titleStmt><title xml:lang="en">Developing clinically relevant biomarkers in inflammatory arthritis: A multiplatform approach for serum candidate protein discovery</title>
<author><name sortKey="Mcardle, Angela" sort="Mcardle, Angela" uniqKey="Mcardle A" first="Angela" last="Mcardle">Angela Mcardle</name>
</author>
<author><name sortKey="Qasim Butt, Aisha" sort="Qasim Butt, Aisha" uniqKey="Qasim Butt A" first="Aisha" last="Qasim Butt">Aisha Qasim Butt</name>
</author>
<author><name sortKey="Szentpetery, Agnes" sort="Szentpetery, Agnes" uniqKey="Szentpetery A" first="Agnes" last="Szentpetery">Agnes Szentpetery</name>
</author>
<author><name sortKey="De Jager, Wilco" sort="De Jager, Wilco" uniqKey="De Jager W" first="Wilco" last="De Jager">Wilco De Jager</name>
</author>
<author><name sortKey="De Roock, Sytze" sort="De Roock, Sytze" uniqKey="De Roock S" first="Sytze" last="De Roock">Sytze De Roock</name>
</author>
<author><name sortKey="Fitzgerald, Oliver" sort="Fitzgerald, Oliver" uniqKey="Fitzgerald O" first="Oliver" last="Fitzgerald">Oliver Fitzgerald</name>
</author>
<author><name sortKey="Pennington, Stephen R" sort="Pennington, Stephen R" uniqKey="Pennington S" first="Stephen R." last="Pennington">Stephen R. Pennington</name>
</author>
</titleStmt>
<publicationStmt><idno type="wicri:source">ISTEX</idno>
<idno type="RBID">ISTEX:F023E7FCEABE0F56C5D441692BAE04C3B468B253</idno>
<date when="2016" year="2016">2016</date>
<idno type="doi">10.1002/prca.201500046</idno>
<idno type="url">https://api.istex.fr/ark:/67375/WNG-5HTJNHCH-R/fulltext.pdf</idno>
<idno type="wicri:Area/Istex/Corpus">001D06</idno>
<idno type="wicri:explorRef" wicri:stream="Istex" wicri:step="Corpus" wicri:corpus="ISTEX">001D06</idno>
<idno type="wicri:Area/Istex/Curation">001D06</idno>
<idno type="wicri:Area/Istex/Checkpoint">000039</idno>
<idno type="wicri:explorRef" wicri:stream="Istex" wicri:step="Checkpoint">000039</idno>
<idno type="wicri:doubleKey">1862-8346:2016:Mcardle A:developing:clinically:relevant</idno>
<idno type="wicri:Area/Main/Merge">000E21</idno>
<idno type="wicri:Area/Main/Curation">000E20</idno>
<idno type="wicri:Area/Main/Exploration">000E20</idno>
</publicationStmt>
<sourceDesc><biblStruct><analytic><title level="a" type="main">Developing clinically relevant biomarkers in inflammatory arthritis: A multiplatform approach for serum candidate protein discovery</title>
<author><name sortKey="Mcardle, Angela" sort="Mcardle, Angela" uniqKey="Mcardle A" first="Angela" last="Mcardle">Angela Mcardle</name>
<affiliation wicri:level="4"><country xml:lang="fr">Irlande (pays)</country>
<wicri:regionArea>School of Medicine and Medical Science, UCD Conway Institute, University College Dublin, Dublin, Belfield</wicri:regionArea>
<orgName type="university">University College Dublin</orgName>
<placeName><settlement type="city">Dublin</settlement>
<region type="région" nuts="2">Leinster</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Qasim Butt, Aisha" sort="Qasim Butt, Aisha" uniqKey="Qasim Butt A" first="Aisha" last="Qasim Butt">Aisha Qasim Butt</name>
<affiliation wicri:level="4"><country xml:lang="fr">Irlande (pays)</country>
<wicri:regionArea>School of Medicine and Medical Science, UCD Conway Institute, University College Dublin, Dublin, Belfield</wicri:regionArea>
<orgName type="university">University College Dublin</orgName>
<placeName><settlement type="city">Dublin</settlement>
<region type="région" nuts="2">Leinster</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Szentpetery, Agnes" sort="Szentpetery, Agnes" uniqKey="Szentpetery A" first="Agnes" last="Szentpetery">Agnes Szentpetery</name>
<affiliation wicri:level="1"><country xml:lang="fr">Irlande (pays)</country>
<wicri:regionArea>Department of Rheumatology, St. Vincent's University Hospital, Dublin, Elm Park</wicri:regionArea>
<wicri:noRegion>Elm Park</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="De Jager, Wilco" sort="De Jager, Wilco" uniqKey="De Jager W" first="Wilco" last="De Jager">Wilco De Jager</name>
<affiliation wicri:level="3"><country xml:lang="fr">Pays-Bas</country>
<wicri:regionArea>Department of Pediatric Immunology, Laboratory of Translational Immunology LTI, Wilhelmia Children's Hospital, University Medical Centre Utrecht, Utrecht</wicri:regionArea>
<placeName><settlement type="city">Utrecht</settlement>
<region nuts="2" type="province">Utrecht (province)</region>
</placeName>
</affiliation>
<affiliation wicri:level="3"><country xml:lang="fr">Pays-Bas</country>
<wicri:regionArea>Multiplex Core Facility, Laboratory of Translational Immunology LTI, University Medical Centre Utrecht, Utrecht</wicri:regionArea>
<placeName><settlement type="city">Utrecht</settlement>
<region nuts="2" type="province">Utrecht (province)</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="De Roock, Sytze" sort="De Roock, Sytze" uniqKey="De Roock S" first="Sytze" last="De Roock">Sytze De Roock</name>
<affiliation wicri:level="3"><country xml:lang="fr">Pays-Bas</country>
<wicri:regionArea>Department of Pediatric Immunology, Laboratory of Translational Immunology LTI, Wilhelmia Children's Hospital, University Medical Centre Utrecht, Utrecht</wicri:regionArea>
<placeName><settlement type="city">Utrecht</settlement>
<region nuts="2" type="province">Utrecht (province)</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Fitzgerald, Oliver" sort="Fitzgerald, Oliver" uniqKey="Fitzgerald O" first="Oliver" last="Fitzgerald">Oliver Fitzgerald</name>
<affiliation wicri:level="4"><country xml:lang="fr">Irlande (pays)</country>
<wicri:regionArea>School of Medicine and Medical Science, UCD Conway Institute, University College Dublin, Belfield, Dublin</wicri:regionArea>
<orgName type="university">University College Dublin</orgName>
<placeName><settlement type="city">Dublin</settlement>
<region type="région" nuts="2">Leinster</region>
</placeName>
</affiliation>
<affiliation wicri:level="1"><country xml:lang="fr">Irlande (pays)</country>
<wicri:regionArea>Department of Rheumatology, St. Vincent's University Hospital, Dublin, Elm Park</wicri:regionArea>
<wicri:noRegion>Elm Park</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Pennington, Stephen R" sort="Pennington, Stephen R" uniqKey="Pennington S" first="Stephen R." last="Pennington">Stephen R. Pennington</name>
<affiliation wicri:level="4"><country xml:lang="fr">Irlande (pays)</country>
<wicri:regionArea>School of Medicine and Medical Science, UCD Conway Institute, University College Dublin, Dublin, Belfield</wicri:regionArea>
<orgName type="university">University College Dublin</orgName>
<placeName><settlement type="city">Dublin</settlement>
<region type="région" nuts="2">Leinster</region>
</placeName>
</affiliation>
<affiliation wicri:level="4"><country xml:lang="fr" wicri:curation="lc">Irlande (pays)</country>
<wicri:regionArea>: Professor Stephen Pennington, UCD Conway Institute, University College Dublin, Belfield, Dublin 4</wicri:regionArea>
<orgName type="university">University College Dublin</orgName>
<placeName><settlement type="city">Dublin</settlement>
<region type="région" nuts="2">Leinster</region>
</placeName>
</affiliation>
<affiliation wicri:level="1"><country wicri:rule="url">Irlande (pays)</country>
</affiliation>
</author>
</analytic>
<monogr></monogr>
<series><title level="j" type="main">PROTEOMICS – Clinical Applications</title>
<title level="j" type="sub">Musculoskeletal Diseases</title>
<title level="j" type="alt">PROTEOMICS CLINICAL APPLICATIONS</title>
<idno type="ISSN">1862-8346</idno>
<idno type="eISSN">1862-8354</idno>
<imprint><biblScope unit="vol">10</biblScope>
<biblScope unit="issue">6</biblScope>
<biblScope unit="page" from="691">691</biblScope>
<biblScope unit="page" to="698">698</biblScope>
<biblScope unit="page-count">8</biblScope>
<date type="published" when="2016-06">2016-06</date>
</imprint>
<idno type="ISSN">1862-8346</idno>
</series>
</biblStruct>
</sourceDesc>
<seriesStmt><idno type="ISSN">1862-8346</idno>
</seriesStmt>
</fileDesc>
<profileDesc><textClass></textClass>
</profileDesc>
</teiHeader>
<front><div type="abstract">Purpose: To identify candidate biomarkers that have the potential to distinguish between patients with psoriatic arthritis (PsA) or rheumatoid arthritis (RA) and explore the value of combining different protein discovery platforms for the development of a multiplexed protein biomarker panel. Experimental design: Serum samples from 32 patients (PsA; n = 16 and RA; n = 16) defined as active, early onset, and treatment naïve were analyzed using unbiased label‐free LC‐MS/MS, a microsphere bead‐based immunoassay (Luminex xMAP) and an aptamer‐based assay (SOMAscan). Results: LC‐MS/MS was used to quantify 324 proteins, while the Luminex xMAP targeted 48 proteins and SOMAscan supported the measurement of 1129 proteins. The combined data from these techniques gave reproducible quantification of 1501 proteins in total. Of these, 42 (LC‐MS/MS), 3 (Luminex xMAP), and 127 (SOMAscan) proteins were found to be differentially expressed between PsA and RA (p < 0.05). Conclusion and clinical relevance: Using three different and potentially complementary proteomic platforms we identified a total of 172 proteins that are differentially expressed in patients with PsA compared to RA. These proteins collectively represent candidates for inclusion in a protein signature that could be developed as a diagnostic test to discriminate patients with PsA from RA and therefore be of clinical utility.</div>
</front>
</TEI>
<affiliations><list><country><li>Irlande (pays)</li>
<li>Pays-Bas</li>
</country>
<region><li>Leinster</li>
<li>Utrecht (province)</li>
</region>
<settlement><li>Dublin</li>
<li>Utrecht</li>
</settlement>
<orgName><li>University College Dublin</li>
</orgName>
</list>
<tree><country name="Irlande (pays)"><region name="Leinster"><name sortKey="Mcardle, Angela" sort="Mcardle, Angela" uniqKey="Mcardle A" first="Angela" last="Mcardle">Angela Mcardle</name>
</region>
<name sortKey="Fitzgerald, Oliver" sort="Fitzgerald, Oliver" uniqKey="Fitzgerald O" first="Oliver" last="Fitzgerald">Oliver Fitzgerald</name>
<name sortKey="Fitzgerald, Oliver" sort="Fitzgerald, Oliver" uniqKey="Fitzgerald O" first="Oliver" last="Fitzgerald">Oliver Fitzgerald</name>
<name sortKey="Pennington, Stephen R" sort="Pennington, Stephen R" uniqKey="Pennington S" first="Stephen R." last="Pennington">Stephen R. Pennington</name>
<name sortKey="Pennington, Stephen R" sort="Pennington, Stephen R" uniqKey="Pennington S" first="Stephen R." last="Pennington">Stephen R. Pennington</name>
<name sortKey="Pennington, Stephen R" sort="Pennington, Stephen R" uniqKey="Pennington S" first="Stephen R." last="Pennington">Stephen R. Pennington</name>
<name sortKey="Qasim Butt, Aisha" sort="Qasim Butt, Aisha" uniqKey="Qasim Butt A" first="Aisha" last="Qasim Butt">Aisha Qasim Butt</name>
<name sortKey="Szentpetery, Agnes" sort="Szentpetery, Agnes" uniqKey="Szentpetery A" first="Agnes" last="Szentpetery">Agnes Szentpetery</name>
</country>
<country name="Pays-Bas"><region name="Utrecht (province)"><name sortKey="De Jager, Wilco" sort="De Jager, Wilco" uniqKey="De Jager W" first="Wilco" last="De Jager">Wilco De Jager</name>
</region>
<name sortKey="De Jager, Wilco" sort="De Jager, Wilco" uniqKey="De Jager W" first="Wilco" last="De Jager">Wilco De Jager</name>
<name sortKey="De Roock, Sytze" sort="De Roock, Sytze" uniqKey="De Roock S" first="Sytze" last="De Roock">Sytze De Roock</name>
</country>
</tree>
</affiliations>
</record>
Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Sante/explor/ChloroquineV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000E20 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 000E20 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien |wiki= Sante |area= ChloroquineV1 |flux= Main |étape= Exploration |type= RBID |clé= ISTEX:F023E7FCEABE0F56C5D441692BAE04C3B468B253 |texte= Developing clinically relevant biomarkers in inflammatory arthritis: A multiplatform approach for serum candidate protein discovery }}
This area was generated with Dilib version V0.6.33. |